Metalresponsive transcription factor-1 (MTF-1) is a zinc
finger protein with a central role in heavy metal homeostasis/
detoxification. MTF-1 binds to DNA sequence
motifs known as metal response elements (MREs) with a
core consensus TGCRCNC. Since MTF-1 is also involved
in other stress responses, we tested whether it is able to
recognize different types of DNA sequence motifs. To this
end we selected MTF-1-binding oligonucleotides from a
collection of random sequences. Since MTF-1 binds to
known target sequences at relatively high zinc concentrations,
oligonucleotide selection was performed in a
mammalian cell nuclear extract both at high and low zinc
concentrations. Irrespective of zinc concentration, we
find a robust representation of MRE consensus sequences,
however with specific features. Selection was most
efficient at 100 M zinc, yielding many oligonucleotides
with two MRE motifs in divergent orientation of the
sequence
Print ISSN: 1431-6730
Volume: 385, 07/2004
Pages: 623 - 632